Reference

ffindex_from_fasta(1)

populate index from FASTA file

NAME

ffindex_from_fasta - populate index from FASTA file

DESCRIPTION

USAGE: ffindex_from_fasta -v | [-s] data_filename index_filename fasta_filename

-s

sort index file

-i

use identifier as name (you probably want -s too)

-n

use incremental number as id (default)

-v

print version

ENVIRONMENT

FFINDEX_MAX_INDEX_ENTRIES - allocate memory for this number of entries

Designed and implemented by Andreas Hauser <[email protected]>.

BUGS

User feedback is welcome, especially bugs, performance issues and last but not least convenience of the programs and API.

Email Andreas Hauser [email protected].

History

-i since Debian 10 (Buster); -n since Debian 10 (Buster); -v since Debian 10 (Buster).