---
name: "fastq_pair"
section: "1"
platform: "linux"
package: "fastq-pair"
version: "1.0-3"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/fastq_pair"
---

# fastq\_pair(1)

Rewrite paired end fastq files so that all reads have a mate and to separate out singletons

## NAME

fastq\_pair - Rewrite paired end fastq files so that all reads have a mate and to separate out singletons

## DESCRIPTION

fastq\_pair \[options\] \[fastq file 1\] \[fastq file 2\]

OPTIONS **-t** table size (default 100003) **-p** print the number of elements in each bucket in the table **-v** verbose output. This is mainly for debugging

## AUTHOR

 This manpage was written by Nilesh Patra for the Debian distribution and\
  can be used for any other usage of the program.