fastaq-make_random_contigs1
Make contigs of random sequence
Overview
usage: fastaq_make_random_contigs [options] <contigs> <length> <outfile>
Makes a multi-FASTA file of random sequences, all of the same length. Each base has equal chance of being A,C,G or T
positional arguments:
- contigs
-
Number of contigs to make
- length
-
Length of each contig
- outfile
-
Name of output file
options:
-
-h, --help -
show this help message and exit
-
--first_number FIRST_NUMBER -
If numbering the sequences, the first sequence gets this number [1]
-
--name_by_letters -
Name the contigs A,B,C,... will start at A again if you get to Z
-
--prefix PREFIX -
Prefix to add to start of every sequence name
-
--seed SEED -
Seed for random number generator. Default is to use python's default
History
- Debian 13 (Trixie): the text shown here
- Debian 12 (Bookworm)
- Debian 11 (Bullseye)
- Debian 10 (Buster)
- Debian 9 (Stretch)