NAME
fastaq_deinterleave - Splits interleaved paired file into two separate files
DESCRIPTION
usage: fastaq_deinterleave [options] <infile> <out_fwd> <out_rev>
Deinterleaves sequence file, so that reads are written alternately between two output files
positional arguments:
- infile
-
Name of fasta/q file to be deinterleaved
- out_fwd
-
Name of output fasta/q file of forwards reads
- out_rev
-
Name of output fasta/q file of reverse reads
options:
- -h, --help
-
show this help message and exit
- --fasta_out
-
Use this to write output as fasta (default is same as input)