extractUnmappedSubreads.py1
Extract unmapped subreads from a fasta file
Part of extractUnmappedSubreads(1).
Overview
usage: extractUnmappedSubreads [-h] [--verbose] [--version] [--profile]
- [--debug]
-
fasta cmp.h5 [cmp.h5 ...]
Extract unmapped subreads from a fasta file.
positional arguments:
- fasta
-
a fasta file containing all subreads.
- cmp.h5
-
input cmp.h5 files.
optional arguments:
-
-h, --help -
show this help message and exit
-
--verbose, -v -
Set the verbosity level (default: None)
-
--version -
show program's version number and exit
-
--profile -
Print runtime profile at exit (default: False)
-
--debug -
Catch exceptions in debugger (requires ipdb) (default: False)
History
- Debian 10 (Buster): the text shown here
- Debian 9 (Stretch)