NAME
dendropy-format - convert files from one format to another
DESCRIPTION
usage: dendropy-format --from [FORMAT] --to [FORMAT] [OPTIONS] <SOURCE-FILE> > DEST-FILE
options:
- -h, --help
-
show this help message and exit
Source:
- source_file
-
Path to source data.
- -f FORMAT, --from FORMAT
-
Format of data source.
- -d {dna,rna,standard}, --data-type {dna,rna,standard}
-
Type of data
Destination:
- -t FORMAT, --to FORMAT
-
Format of data source.
- -u, --unquoted-underscores
-
[NEXUS/Newick:] Do not quote labels with undescores.
- --recode-uncertain {missing,gap}
-
Recode ambiguous or uncertain characters as missing ('?') or gaps ('-')