NAME
copymat - convert ASCII matrices into a database suitable for quick reading
SYNOPSIS
copymat [-] [-H] [-P filename] [-W N] [-f X] [-r F]
DESCRIPTION
copymat converts ASCII matrices produced by makemat(1) into a database that can be read into memory quickly.
OPTIONS
A summary of options is included below.
- -
-
Print usage message
- -H
-
Print help; overrides all other arguments
- -P filename
-
Database for matrix profiles (default = stdin)
- -W N
-
Word size for RPS database (default = 3)
- -f X
-
Threshold for extending hits for RPS database (default = 11.0)
- -r F
-
Do not create RPS mem map file(s)
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO
impala(1), makemat(1), /usr/share/doc/blast2/impala.html