---
name: "coordinateTranslate"
section: "1"
platform: "linux"
package: "progressivemauve"
version: "1.2.0+4713+dfsg-5+b3"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/coordinateTranslate"
---

# coordinateTranslate(1)

part of mauveAligner package

## NAME

coordinateTranslate - part of mauveAligner package

## SYNOPSIS

**coordinateTranslate** *\<XMFA alignment\> \<alignment coordinate file\>*

## DESCRIPTION

Alignment coordinate file should be structured into 2 tab-delimited columns: \<block ID\> \<column\> Output will be the nearest aligned position for each genome in the block, with 0 entries for genomes undefined in the block