---
name: "convert_vcf_to_features"
section: "1"
platform: "linux"
package: "cct"
version: "1:1.0.3-1"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/convert_vcf_to_features"
---

# convert\_vcf\_to\_features(1)

visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences

## NAME

convert\_vcf\_to\_features - visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences

## DESCRIPTION

Unknown option: help 1

### USAGE:

-

  convert\_vcf\_to\_features **-i** INFILE **-o** OUTFILE

### DESCRIPTION:

-

  This script converts a VCF (Variant Call Format) file into a feature file (GFF). The resulting GFF file can be used by the CGview Comparison tool. Simply place the GFF file in the 'features' directory of a CCT project.

### REQUIRED ARGUMENTS:

**-i**, **--input** FILE

-

  Input VCF file (tab deliminated).

**-o**, **--output** FILE

-

  Name to call the output file.

### EXAMPLE:

-

  convert\_vcf\_to\_features **-i** input.vcf **-o** output.gff

## AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.