---
name: "combine_tradis_plots"
section: "1"
platform: "linux"
package: "bio-tradis"
version: "1.4.1+dfsg-1"
release: "Debian 10 (Buster)"
platforms: ["linux"]
url: "https://new.carta.tech/combine_tradis_plots"
---

# combine\_tradis\_plots(1)

bio-tradis: combine multiple plotfiles and generate updated statistics

## NAME

combine\_tradis\_plots - bio-tradis: combine multiple plotfiles and generate updated statistics

## SYNOPSIS

**combine\_tradis\_plots** *-p plots.txt*

## DESCRIPTION

Combine multiple plotfiles and generate updated statistics for the combined files. Takes a tab-delimited file with an ID as the first column followed by a list of plotfiles to combine per row. The ID will be used to name the new plotfile and as an identifier in the stats file, so ensure these are unique.

For example, an input file named plots\_to\_combine.txt:

-

  tradis1 plot1.1.gz      plot1.2.gz plot1.3.gz

-

  tradis2 plot2.1.gz      plot2.2.gz

-

  tradis3 plot3.1.gz      plot3.2.gz plot3.3.gz   plot3.4.gz

will produce

- 1

  a directory named combined with 3 files - tradis1.insertion\_site\_plot.gz, tradis2.insertion\_site\_plot.gz, tradis3.insertion\_site\_plot.gz

- 2

  a stats file named plots\_to\_combine.stats

## OPTIONS

- **-p**\|plotfile

  file with plots to be combined

- **-o**\|output\_dir

  name of directory for output (default: combined)

## AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.