---
name: "bp_biogetseq"
section: "1p"
platform: "linux"
package: "bioperl"
version: "1.7.8-1"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/bp_biogetseq"
---

# bp\_biogetseq(1p)

sequence retrieval using OBDA registry

## NAME

bp\_biogetseq - sequence retrieval using OBDA registry

## DESCRIPTION

This script retrieves sequences from the source defined by users registry setup.  The current alternatives are from a local indexed file, sql database or over the web.

## USAGE

```
  Usage: bp_biogetseq --dbname embl --format embl
                   --namespace acc id [ ids... ]
         * dbname defaults to embl
         * format defaults to embl
         * namespace defaults to 'acc' ['id', 'acc', 'version']
         * unnamed arguments are ids in the given namespace
```