blast_top_hits1
Reduces a blast or blat output file to the top hit for each query sequence only
Usage
blast_top_hits --input
blast_out
--mode
blast
<options>
Overview
Reduces a blast or blat output file to the top hit for each query sequence only.
This program belongs to seer(1) (Sequence Element (kmer) Enrichment Analysis).
Options
Required
-
--input -
BLAST output file in
-m6/-outfmt 6 or BLAT .psl file
-
--mode -
Either blast or blat
Optional
-
--full_query -
The entire query must be reported as a match to appear in the output
-
-h, --help -
Shows this help.
Releases
Unchanged in 5 releases since Debian 9 (Stretch).