NAME
biom - Biological Observation Matrix (BIOM) format (Python 3)
SYNOPSIS
biom [OPTIONS] COMMAND [ARGS]...
OPTIONS
- --version
-
Show the version and exit.
- -h, --help
-
Show this message and exit.
Commands:
- add-metadata
-
Add metadata to a BIOM table.
- convert
-
Convert to/from the BIOM table format.
- export-metadata
-
Export metadata as TSV.
- from-uc
-
Create a BIOM table from a vsearch/uclust/usearch BIOM...
- head
-
Dump the first bit of a table.
- normalize-table
-
Normalize a BIOM table.
- show-install-info
-
Provide information about the biom-format installation.
- subset-table
-
Subset a BIOM table.
- summarize-table
-
Summarize sample or observation data in a BIOM table.
- table-ids
-
Dump IDs in a table.
- validate-table
-
Validate a BIOM-formatted file.
AUTHOR
This manpage was written by Nilesh Patra for the Debian distribution and
can be used for any other usage of the program.