Reference

beagle_BeagleFactory(3)

NAME

beagle.BeagleFactory -

SYNOPSIS

Static Public Member Functions

static List< ResourceDetails > getResourceDetails ()
static ResourceDetails getResourceDetails (int resourceNumber)
static Beagle loadBeagleInstance (int tipCount, int partialsBufferCount, int compactBufferCount, int stateCount, int patternCount, int eigenBufferCount, int matrixBufferCount, int categoryCount, int scaleBufferCount, int[] resourceList, long preferenceFlags, long requirementFlags)
static void main (String[] argv)

Detailed Description

Author:

Marc Suchard

Andrew Rambaut

Member Function Documentation

static void beagle.BeagleFactory.main (String[]argv) [inline], [static]

< Number of tip data elements (input)

< Number of partials buffers to create (input)

< Number of compact state representation buffers to create (input)

< Number of states in the continuous-time Markov chain (input)

< Number of site patterns to be handled by the instance (input)

< Number of rate matrix eigen-decomposition buffers to allocate (input)

< Number of rate matrix buffers (input)

< Number of rate categories (input)

< Number of scale buffers (input)

Author

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