NAME
bamcleanheader.py - remove illegal and malformed fields from a BAM file's header
SYNOPSIS
bamcleanheader.py [-h] [-S] [input [input ...]]
DESCRIPTION
remove illegal and malformed fields from a BAM file's header
OPTIONS
positional arguments:
- input
-
SAM/BAM file to inject header lines into. If '-' or absent then defaults to stdin.
optional arguments:
- -h, --help
-
show this help message and exit
- -S, --is_sam
-
input is SAM
AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.