NAME
asn2idx - index ASN.1 Bioseq-sets for fast access to individual sequences
SYNOPSIS
asn2idx [-] [-b] [-d dir] [-f filter] -p path [-r path] [-t] [-x str]
DESCRIPTION
asn2idx indexes ASN.1 Bioseq-sets (such as GenBank release files) to speed retrieval of the individual sequences they contain. For each file that it processes, it yields an output file in the same directory with the extension .idx.
OPTIONS
A summary of options is included below.
- -
-
Print usage message
- -b
-
Bioseq-sets are Binary
- -d dir
-
Required Subdirectory
- -f filter
-
Filter (default = gbcon,gbest,gbgss,gbhtg,gbsts)
- -p path
-
Path to Files
- -p path
-
Path for Results
- -t
-
Recurse
- -x str
-
File Selection Substring (default = .aso)
AUTHOR
The National Center for Biotechnology Information.