NAME
arrow - HMM-based consensus caller for Pacific Biosciences data
DESCRIPTION
See genomicconsensus(7) for a more detailed description of arrow.
OPTIONS
- -h, --help
-
Show summary of options.
HMM-based consensus caller for Pacific Biosciences data
arrow - HMM-based consensus caller for Pacific Biosciences data
See genomicconsensus(7) for a more detailed description of arrow.
Show summary of options.
--help since Debian 3.1 (Sarge);
-h since Debian 3.1 (Sarge).
--annotations until Debian 5.0 (Lenny);
--append-stoplist-file until Debian 5.0 (Lenny);
--binary-word-counts until Debian 5.0 (Lenny);
--compare until Debian 5.0 (Lenny);
--data-dir until Debian 5.0 (Lenny);
--event-document-then-word-document-length until Debian 5.0 (Lenny);
--event-model until Debian 5.0 (Lenny);
--exclude-filename until Debian 5.0 (Lenny);
--flex-mail until Debian 5.0 (Lenny);
--flex-tagged until Debian 5.0 (Lenny);
--gram-size until Debian 5.0 (Lenny);
--index until Debian 5.0 (Lenny);
--infogain-event-model until Debian 5.0 (Lenny);
--istext-avoid-uuencode until Debian 5.0 (Lenny);
--lex-alphanum until Debian 5.0 (Lenny);
--lex-pipe-command until Debian 5.0 (Lenny);
--lex-suffixing until Debian 5.0 (Lenny);
--lex-white until Debian 5.0 (Lenny);
--max-num-words-per-document until Debian 5.0 (Lenny);
--method until Debian 5.0 (Lenny);
--no-backspaces until Debian 5.0 (Lenny);
--no-stemming until Debian 5.0 (Lenny);
--no-stoplist until Debian 5.0 (Lenny);
--num-hits-to-show until Debian 5.0 (Lenny);
--print-coo until Debian 5.0 (Lenny);
--print-idf until Debian 5.0 (Lenny);
--print-word-scores until Debian 5.0 (Lenny);
--prune-vocab-by-doc-count until Debian 5.0 (Lenny);
--prune-vocab-by-infogain until Debian 5.0 (Lenny);
--prune-vocab-by-occur-count until Debian 5.0 (Lenny);
--query until Debian 5.0 (Lenny);
--query-forking-server until Debian 5.0 (Lenny);
--random-seed until Debian 5.0 (Lenny);
--replace-stoplist-file until Debian 5.0 (Lenny);
--score-precision until Debian 5.0 (Lenny);
--skip-header until Debian 5.0 (Lenny);
--skip-html until Debian 5.0 (Lenny);
--smoothing-dirichlet-filename until Debian 5.0 (Lenny);
--smoothing-dirichlet-weight until Debian 5.0 (Lenny);
--smoothing-goodturing-k until Debian 5.0 (Lenny);
--smoothing-method until Debian 5.0 (Lenny);
--usage until Debian 5.0 (Lenny);
--use-stemming until Debian 5.0 (Lenny);
--use-stoplist until Debian 5.0 (Lenny);
--use-unknown-word until Debian 5.0 (Lenny);
--verbosity until Debian 5.0 (Lenny);
--version until Debian 5.0 (Lenny);
--xxx-words-only until Debian 5.0 (Lenny);
-? until Debian 5.0 (Lenny);
-D until Debian 5.0 (Lenny);
-H until Debian 5.0 (Lenny);
-O until Debian 5.0 (Lenny);
-S until Debian 5.0 (Lenny);
-T until Debian 5.0 (Lenny);
-V until Debian 5.0 (Lenny);
-b until Debian 5.0 (Lenny);
-c until Debian 5.0 (Lenny);
-d until Debian 5.0 (Lenny);
-g until Debian 5.0 (Lenny);
-i until Debian 5.0 (Lenny);
-m until Debian 5.0 (Lenny);
-n until Debian 5.0 (Lenny);
-q until Debian 5.0 (Lenny);
-s until Debian 5.0 (Lenny);
-v until Debian 5.0 (Lenny).