NAME
Aevol - an in silico experimental evolution platform
SYNOPSIS
aevol_misc_lineage -h | --help
aevol_misc_lineage -V | --version
aevol_misc_lineage [-b TIMESTEP] [-e TIMESTEP] [-I INDEX | -R RANK] [-F] [-v]
DESCRIPTION
Aevol is a simulation platform that allows one to let populations of digital organisms evolve in different conditions and study experimentally the mechanisms responsible for the structuration of the genome and the transcriptome.
- aevol_misc_lineage
-
reconstruct the lineage of a given individual from the tree files
OPTIONS
- -h, --help
-
print help, then exit
- -V, --version
-
print version number, then exit
-b, --begin TIMESTEP
specify time t0 up to which to reconstruct the lineage
-e, --end TIMESTEP
specify time t_end of the indiv whose lineage is to be reconstructed
-I, --index INDEX
specify the index of the indiv whose lineage is to be reconstructed
-R, --rank RANK
specify the rank of the indiv whose lineage is to be reconstructed default: best individual
-F, --full-check
perform genome checks whenever possible
-v, --verbose
be verbose
SEE ALSO
aevol_create, aevol_modify, aevol_propagate, aevol_run