Name
SWISS::Ref.pm
Description
SWISS::Ref represents a single reference of a SWISS-PROT + TREMBL entry as specified in the user manual http://www.expasy.org/sprot/userman.html .
Inherits from
SWISS::BaseClass.pm
Attributes
- "RN"
-
The reference number.
- "RP"
-
The RP line(s), unwrapped as a string.
- "RC"
-
Zero or more RC lines.
Data structure: {Token}[qualifier1, qualifierN].
A hash of arrays. Hash keys are the RC tokens, array elements are the qualifiers for that token.
- "RX"
-
References to bibliographic databases.
Data structure: {Database}[identifier1, identifierN].
A hash of arrays. Hash keys are the names of bibliographic databases, array elements are the identifiers of the reference for that database.
- "RG"
-
The RG line(s), unwrapped as a string.
- "RA"
-
The list of Authors.
An object of type SWISS::ListBase.
- "RT"
-
The publication title, unwrapped as a string.
- "RL"
-
The RL line.
Data structure: String.
Methods
Standard methods
- new
- fromText
- toText
Writing methods
- add_MedlineID
-
Add a RX line 'MEDLINE; nnnnnnnn.' to the reference.
- add_Author
-
Add an author to the RA line of the reference.
- rc_sort
-
Sort elements of the RC line alphabetically.
POD ERRORS
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- Around line 542:
-
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