carta
MSPCollect(1)

MSPCollect1

Convert a blast output into an msp file

Usage

MSPCollect BLAST_output_file > name_of_your_MSP_file

Overview

Tool which converts a BLAST output into an MSP file, which is used by the repeatmasker-recon as input. In the MSP file, each MSP that BLAST reports is turned into a one-line summary in the following format:

score %iden start end query_name start end subject_name

Author

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

From repeatmasker-recon 1.08-8 in Debian 13 (Trixie). Parsed by carta from the page's man source.