NAME
CAI - calculate codon adaptation index for a DNA sequence
SYNOPSIS
CAI [OPTIONS]
OPTIONS
- -s, --sequence FILE
-
The sequence to calculate the CAI for. [required]
- -r, --reference FILE
-
The reference sequences to calculate CAI against. [required]
- -g, --genetic-code INTEGER
-
The genetic code to use. Defaults to 11.
- --help
-
Show this message and exit.