Reference

Bio::Tradis::Analysis::InsertSite(3pm)

Take in a bam file and plot the start position of each read

NAME

Bio::Tradis::Analysis::InsertSite - Take in a bam file and plot the start position of each read

VERSION

version 1.4.5

SYNOPSIS

Takes in a mapped BAM file and plot the start position of each read

   use Bio::Tradis::Analysis::InsertSite;
   my $insertsite_plots_from_bam = Bio::Tradis::Analysis::InsertSite->new(
      filename => 'my_file.bam',
      output_base_filename => 'my_output_file'
     );
   $insertsite_plots_from_bam->create_plots();

NAME

InsertSite.pm - Take in a bam file and plot the start position of each read

AUTHOR

Carla Cummins <[email protected]>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007

History