---
name: "Bio::Tools::PSort::ModHMM"
section: "3pm"
platform: "linux"
package: "psortb"
version: "3.0.6+dfsg-4+b2"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/Bio::Tools::PSort::ModHMM"
---

# Bio::Tools::PSort::ModHMM(3pm)

Wrapper for the Prodiv\_TMHMM transmembrane helix predictor.

## NAME

Bio::Tools::PSort::ModHMM - Wrapper for the Prodiv\_TMHMM transmembrane helix predictor.

## SYNOPSIS

## DESCRIPTION

## CONSTRUCTOR

## SEE ALSO

## AUTHOR

```
 Matthew Laird <lairdm@sfu.ca>
 Brinkman Laboratory, Simon Fraser University, BC, CANADA
```

## OVERVIEW

PSORT-B is described in Gardy, J.L. et al (2005). PSORT-B V.2.0: Expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome analysis. Bioinformatics. 21:617-623.  Please cite this publication if you use PSORT-B in your research.

The standalone version of PSORT-B is distributed under the GNU  General Public Licence (Gnu GPL) (see the LICENSE file included  in the download) by the Brinkman Laboratory, Simon Fraser  University, Burnaby, B.C., Canada.

This standalone version of PSORT-B has initially been developed  for the Linux environment.

This document describes the installation of the PSORT-B version  2.x command line program and the PSORT-B server packages. For  most purposes, following the installation instructions for the  command line version will be sufficient.

For further information, please contact psort-mail@sfu.ca.

## LICENSE

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA