Reference

Bio::Roary::External::IterativeCdhit(3pm)

Iteratively run CDhit

NAME

Bio::Roary::External::IterativeCdhit - Iteratively run CDhit

VERSION

version 3.13.0

SYNOPSIS

Iteratively run CDhit

   use Bio::Roary::External::IterativeCdhit;
   
   my $seg= Bio::Roary::External::IterativeCdhit->new(
     output_cd_hit_filename => '',
     output_combined_filename  => '',
     number_of_input_files => 10, 
     output_filtered_clustered_fasta  => '',
   );
   
   $seg->run();

AUTHOR

Andrew J. Page <[email protected]>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007

History