---
name: "Bio::Roary::CombinedProteome"
section: "3pm"
platform: "linux"
package: "roary"
version: "3.13.0+dfsg-2"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/Bio::Roary::CombinedProteome"
---

# Bio::Roary::CombinedProteome(3pm)

Take in multiple FASTA sequences containing proteomes and concat them together and output a FASTA file, filtering out more than 5% X's

## NAME

Bio::Roary::CombinedProteome - Take in multiple FASTA sequences containing proteomes and concat them together and output a FASTA file, filtering out more than 5% X's

## VERSION

version 3.13.0

## SYNOPSIS

Take in multiple FASTA sequences containing proteomes and concat them together and output a FASTA file, filtering out more than 5% X's\
    use Bio::Roary::CombinedProteome;

```
   my $obj = Bio::Roary::CombinedProteome->new(
     proteome_files   => ['abc.fa','efg.fa'],
     output_filename   => 'example_output.fa',
     maximum_percentage_of_unknowns => 5.0,
   );
   $obj->create_combined_proteome_file;
```

## AUTHOR

Andrew J. Page \<ap13@sanger.ac.uk\>

## COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

```
  The GNU General Public License, Version 3, June 2007
```