---
name: "Bio::Graphics::Glyph::heat_map_ideogram"
section: "3pm"
platform: "linux"
package: "libbio-graphics-perl"
version: "2.40-6"
release: "Debian 13 (Trixie)"
platforms: ["linux"]
url: "https://new.carta.tech/Bio::Graphics::Glyph::heat_map_ideogram"
---

# Bio::Graphics::Glyph::heat\_map\_ideogram(3pm)

The "heat\_map\_ideogram" glyph

## NAME

Bio::Graphics::Glyph::heat\_map\_ideogram - The "heat\_map\_ideogram" glyph

## SYNOPSIS

```
  See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>.
```

## DESCRIPTION

This glyph draws a chromosome ideogram using scored features instead of cytobands.  It is a hybrid of the heat\_map and ideograms glyphs and accepts options for both.  A typical usage would be to pair this glyph with an aggregator that groups scored features such as blast hits or gene\_density bins, etc with a centromere.  The result is a chromosome ideogram that has bands whose colors vary porportionate to the feature score.

### OPTIONS

See Bio::Graphics::Glyph for a full explanation of standard options.

See Bio::Graphics::Glyph::heat\_map for an explanation of heat\_map options.

See Bio::Graphics::Glyph::ideogram for an explanation of ideogram options.

## BUGS

Please report them.

## SEE ALSO

Bio::Graphics::Panel, Bio::Graphics::Glyph, Bio::DB::GFF, Bio::SeqI, Bio::SeqFeatureI, Bio::Das, GD

## AUTHOR

Sheldon McKay \<mckays@cshl.edu\>

Copyright (c) 2006 Cold Spring Harbor Laboratory

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.  See DISCLAIMER.txt for disclaimers of warranty.